Protein ZmMADS11
ZmMADS11 is a protein in the MADS family.
Information
TF Name: ZmMADS11
Species: Maize
TF Family: MADS
Gene Name(Synonym): SI1
Uniprot ID: K7UXY1
Subgenome: 2

Protein ZmMADS11

ZmMADS11 is a protein in the MADS family.

Overview of domains present in v5 transcripts
PF00319PF01486
Zm00001eb272490_T001
Zm00001eb272490_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d036425DAPseq no logo sequence fimo position
Zm00001d036425DAPseq no logo sequence fimo position
Zm00001d036425ChIPseq no logo sequence fimo position
Zm00001d036425PChIPseq no logo sequence fimo position

Interactions where ZmMADS11 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmMADS11 is the target  
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There are 46 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb272490_T001 from maize genome v5

Amino Acid Sequence
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MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPGTDIKTIFDRYQQAIGTSLW
IEQYENMQRTLSHLKDINRGLRTEIRQRMGEDLDSLDFDELRGLEQNVDAALKEVRHRKYHVISTQTDTYKKKVKHSHEA
YKNLQQELVRFSLHTDDRSPLISLALVDRCVRLINPRASWTPLGHAGGPGVRVRGQHGRRRRLGRRGGGAGRRPAGHVRL
PRGAQPAQPARHGLRLPRPPPGLAHPSPCWVVLLDPTAWQCKLVG

MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPGTDIKTIFDRYQQAIGTSLW
IEQYENMQRTLSHLKDINRGLRTEIRQRMGEDLDSLDFDELRGLEQNVDAALKEVRHRKYHVISTQTDTYKKKVKHSHEA
YKNLQQELVRFSLHTDDRSPLISLALVDRCVRLINPRASWTPLGHAGGPGVRVRGQHGRRRRLGRRGGGAGRRPAGHVRL
PRGAQPAQPARHGLRLPRPPPGLAHPSPCWVVLLDPTAWQCKLVG

MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPGTDIKTIFDRYQQAIGTSLW
IEQYENMQRTLSHLKDINRGLRTEIRQRMGEDLDSLDFDELRGLEQNVDAALKEVRHRKYHVISTQTDTYKKKVKHSHEA
YKNLQQELVRFSLHTDDRSPLISLALVDRCVRLINPRASWTPLGHAGGPGVRVRGQHGRRRRLGRRGGGAGRRPAGHVRL
PRGAQPAQPARHGLRLPRPPPGLAHPSPCWVVLLDPTAWQCKLVG

MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPGTDIKTIFDRYQQAIGTSLW
IEQYENMQRTLSHLKDINRGLRTEIRQRMGEDLDSLDFDELRGLEQNVDAALKEVRHRKYHVISTQTDTYKKKVKHSHEA
YKNLQQELVRFSLHTDDRSPLISLALVDRCVRLINPRASWTPLGHAGGPGVRVRGQHGRRRRLGRRGGGAGRRPAGHVRL
PRGAQPAQPARHGLRLPRPPPGLAHPSPCWVVLLDPTAWQCKLVG

MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPGTDIKTIFDRYQQAIGTSLW
IEQYENMQRTLSHLKDINRGLRTEIRQRMGEDLDSLDFDELRGLEQNVDAALKEVRHRKYHVISTQTDTYKKKVKHSHEA
YKNLQQELVRFSLHTDDRSPLISLALVDRCVRLINPRASWTPLGHAGGPGVRVRGQHGRRRRLGRRGGGAGRRPAGHVRL
PRGAQPAQPARHGLRLPRPPPGLAHPSPCWVVLLDPTAWQCKLVG

MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPGTDIKTIFDRYQQAIGTSLW
IEQYENMQRTLSHLKDINRGLRTEIRQRMGEDLDSLDFDELRGLEQNVDAALKEVRHRKYHVISTQTDTYKKKVKHSHEA
YKNLQQELVRFSLHTDDRSPLISLALVDRCVRLINPRASWTPLGHAGGPGVRVRGQHGRRRRLGRRGGGAGRRPAGHVRL
PRGAQPAQPARHGLRLPRPPPGLAHPSPCWVVLLDPTAWQCKLVG

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00319
PF01486
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Nucleotide Sequence
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CTGCACGGCACCCACAATACGGCAC...

GRMZM2G139073_T01 from maize genome v3


Related TFome: pUT3494

Amino Acid Sequence
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MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPGTDIKTIFDRYQQAIGTSLW
IEQYENMQRTLSHLKDINRGLRTEIRQRMGEDLDSLDFDELRGLEQNVDAALKEVRHRKYHVISTQTDTYKKKVKHSHEA
YKNLQQELGMREDPAFGYVDNTGAGVAWDGAAAALGGAPPDMYAFRVVPSQPNLHGMAYGFHDLRLG

Nucleotide Sequence
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ACGGCACCCACAATACGGCACGCGG...

GRMZM2G139073_T02 from maize genome v3

Amino Acid Sequence
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MQRTLSHLKDINRGLRTEIRQRMGEDLDSLDFDELRGLEQNVDAALKEVRHRKYHVISTQTDTYKKKVKHSHEAYKNLQQ
ELGMREDPAFGYVDNTGAGVAWDGAAAALGGAPPDMYAFRVVPSQPNLHGMAYGFHDLRLG

Nucleotide Sequence
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CTAAAGCTCTAAACGATTTTCCATG...

Zm00001d036425_T001 from maize genome v4

Amino Acid Sequence
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MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPGTDIKTIFDRYQQAIGTSLW
IEQYENMQRTLSHLKDINRGLRTEIRQRMGEDLDSLDFDELRGLEQNVDAALKEVKHSHEAYKNLQQELGMREDPAFGYV
DNTGAGVAWDGAAAALGGAPPDMYAFRVVPSQPNLHGMAYGFHDLRLG

Nucleotide Sequence
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ACGGCACCCACAATACGGCACGCGG...

Zm00001d036425_T002 from maize genome v4

Amino Acid Sequence
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MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPGTDIKTIFDRYQQAIGTSLW
IEQYENMQRTLSHLKDINRGLRTEIRQRMGEDLDSLDFDELRGLEQNVDAALKEVRHRKYHVISTQTDTYKKKVKHSHEA
YKNLQQELGMREDPAFGYVDNTGAGVAWDGAAAALGGAPPDMYAFRVVPSQPNLHGMAYGFHDLRLG

Nucleotide Sequence
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AGCACCGGCCTGTTGTGCTGCTCGC...

Zm00001d036425_T003 from maize genome v4

Amino Acid Sequence
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MCCARIRTLQVKHSHEAYKNLQQELVRFSLHTDDRSPLISLALVDRCVRLINPRASWTPLGHAGGPGVRVRGQHGRRRRL
GRRGGGAGRRPAGHVRLPRGAQPAQPARHGLRLPRPPPGLAHPSPCWVVLLDPTAWQCKLVG

Nucleotide Sequence
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ACGATTCAATCGATCGACCTTGCAT...

Zm00001eb272490_T002 from maize genome v5

Amino Acid Sequence
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MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPGTDIKTIFDRYQQAIGTSLW
IEQYENMQRTLSHLKDINRGLRTEIRQRMGEDLDSLDFDELRGLEQNVDAALKEVRHRKYHVISTQTDTYKKKVKHSHEA
YKNLQQELGMREDPAFGYVDNTGAGVAWDGAAAALGGAPPDMYAFRVVPSQPNLHGMAYGFHDLRLG

Nucleotide Sequence
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ACGGCACCCACAATACGGCACGCGG...


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